Reformat a Multiple Sequence Alignment (MSA) file
meta:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
aln:file
Input MSA file
*.{fa,fasta,fas,a2m,a3m,sto,psi,clu,fa.gz,fasta.gz,fas.gz,a2m.gz,a3m.gz,sto.gz,psi.gz,clu.gz}
informat:string
Format of the input MSA file
outformat:string
Format of the output MSA file
msa
${prefix}.${outformat}.gz:file
Gzipped reformatted output MSA file
*.{fas.gz,a2m.gz,a3m.gz,sto.gz,psi.gz,clu.gz}
versions
versions.yml:file
File containing software versions
versions.yml
HH-suite3 for fast remote homology detection and deep protein annotation
